Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Gm23935-201ENSMUST00000102303 57 ntBASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Gm24270-201ENSMUST00000102326 57 ntBASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Gm11025-201ENSMUST00000140773 466 ntBASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Gm24245-201ENSMUST00000157318 57 ntBASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Gm43767-201ENSMUST00000198933 381 ntBASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdha11Q91Y19 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha11Q91Y19 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha11Q91Y19 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha11Q91Y19 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha11Q91Y19 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha11Q91Y19 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.77■□□□□ 0.11
Pcdha11Q91Y19 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Pcdha11Q91Y19 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Pcdha11Q91Y19 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdha11Q91Y19 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha11Q91Y19 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Gm27494-201ENSMUST00000184735 189 ntBASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Asic1-205ENSMUST00000228185 1818 ntBASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdha11Q91Y19 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha11Q91Y19 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms