Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Gm27300-201ENSMUST00000184085 97 ntBASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Gm27335-201ENSMUST00000184758 97 ntBASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb1Q91Y08 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb1Q91Y08 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb1Q91Y08 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.58■□□□□ 0.09
Pcdhb1Q91Y08 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb1Q91Y08 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb1Q91Y08 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Mzt1-203ENSMUST00000227948 952 ntBASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb1Q91Y08 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb1Q91Y08 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb1Q91Y08 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms