Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.14■□□□□ 0.33
Trex1Q91XB0 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.14■□□□□ 0.33
Trex1Q91XB0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trex1Q91XB0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.13■□□□□ 0.33
Trex1Q91XB0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Gm5479-201ENSMUST00000160578 435 ntBASIC17.13■□□□□ 0.33
Trex1Q91XB0 Mir8102-201ENSMUST00000184148 139 ntBASIC17.13■□□□□ 0.33
Trex1Q91XB0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.13■□□□□ 0.33
Trex1Q91XB0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.13■□□□□ 0.33
Trex1Q91XB0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trex1Q91XB0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Trex1Q91XB0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Gm13823-201ENSMUST00000119930 345 ntBASIC17.12■□□□□ 0.33
Trex1Q91XB0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trex1Q91XB0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.11■□□□□ 0.33
Trex1Q91XB0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.11■□□□□ 0.33
Trex1Q91XB0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.11■□□□□ 0.33
Trex1Q91XB0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Trex1Q91XB0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trex1Q91XB0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms