Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.84□□□□□ -0.03
Vsx1Q91V10 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.84□□□□□ -0.03
Vsx1Q91V10 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.84□□□□□ -0.03
Vsx1Q91V10 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vsx1Q91V10 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Vsx1Q91V10 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vsx1Q91V10 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.83□□□□□ -0.03
Vsx1Q91V10 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Vsx1Q91V10 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vsx1Q91V10 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vsx1Q91V10 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vsx1Q91V10 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vsx1Q91V10 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Gm2810-201ENSMUST00000118681 990 ntBASIC14.83□□□□□ -0.04
Vsx1Q91V10 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.83□□□□□ -0.04
Vsx1Q91V10 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vsx1Q91V10 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.82□□□□□ -0.04
Vsx1Q91V10 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Gm29541-201ENSMUST00000191351 678 ntBASIC14.82□□□□□ -0.04
Vsx1Q91V10 Gm43433-201ENSMUST00000196573 481 ntBASIC14.82□□□□□ -0.04
Vsx1Q91V10 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.82□□□□□ -0.04
Vsx1Q91V10 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Syt7-204ENSMUST00000223586 1344 ntBASIC14.82□□□□□ -0.04
Vsx1Q91V10 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.82□□□□□ -0.04
Vsx1Q91V10 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vsx1Q91V10 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.81□□□□□ -0.04
Vsx1Q91V10 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vsx1Q91V10 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms