Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb11Q91UZ8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb11Q91UZ8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Gm11779-201ENSMUST00000118541 368 ntBASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb11Q91UZ8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb11Q91UZ8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb11Q91UZ8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb11Q91UZ8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb11Q91UZ8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb11Q91UZ8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb11Q91UZ8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms