Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Gm6296-201ENSMUST00000222599 943 ntBASIC15.54■□□□□ 0.08
Trim60Q8VI40 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Gm10499-201ENSMUST00000174094 934 ntBASIC15.53■□□□□ 0.08
Trim60Q8VI40 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Gm27646-201ENSMUST00000183989 110 ntBASIC15.53■□□□□ 0.08
Trim60Q8VI40 Gm10819-201ENSMUST00000099988 561 ntBASIC15.53■□□□□ 0.08
Trim60Q8VI40 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim60Q8VI40 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim60Q8VI40 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim60Q8VI40 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim60Q8VI40 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim60Q8VI40 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim60Q8VI40 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trim60Q8VI40 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim60Q8VI40 Gm17807-201ENSMUST00000186869 298 ntBASIC15.52■□□□□ 0.08
Trim60Q8VI40 Gm43767-201ENSMUST00000198933 381 ntBASIC15.52■□□□□ 0.08
Trim60Q8VI40 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.52■□□□□ 0.08
Trim60Q8VI40 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.52■□□□□ 0.07
Trim60Q8VI40 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.51■□□□□ 0.07
Trim60Q8VI40 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.51■□□□□ 0.07
Trim60Q8VI40 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim60Q8VI40 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Trim60Q8VI40 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim60Q8VI40 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim60Q8VI40 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trim60Q8VI40 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Trim60Q8VI40 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms