Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lmcd1Q8VEE1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lmcd1Q8VEE1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Lmcd1Q8VEE1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.94■□□□□ 0.14
Lmcd1Q8VEE1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Lmcd1Q8VEE1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Lmcd1Q8VEE1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Gm4984-201ENSMUST00000115987 360 ntBASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Gm28760-201ENSMUST00000185995 736 ntBASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lmcd1Q8VEE1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Gm19220-201ENSMUST00000222682 803 ntBASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Gm9797-201ENSMUST00000052902 613 ntBASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lmcd1Q8VEE1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Gm10766-202ENSMUST00000194123 606 ntBASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Lmcd1Q8VEE1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lmcd1Q8VEE1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lmcd1Q8VEE1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lmcd1Q8VEE1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lmcd1Q8VEE1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lmcd1Q8VEE1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lmcd1Q8VEE1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lmcd1Q8VEE1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lmcd1Q8VEE1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Lmcd1Q8VEE1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Lmcd1Q8VEE1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms