Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm44350-201ENSMUST00000197197 138 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm44390-201ENSMUST00000197533 144 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm44313-201ENSMUST00000198018 138 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm44486-201ENSMUST00000198508 138 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm44314-201ENSMUST00000199263 138 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm44394-201ENSMUST00000199558 138 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm44484-201ENSMUST00000199873 138 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm44466-201ENSMUST00000200264 138 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Gm44359-201ENSMUST00000200671 138 ntBASIC15.05■□□□□ -0
Vps39Q8R5L3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
Vps39Q8R5L3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps39Q8R5L3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps39Q8R5L3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps39Q8R5L3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Vps39Q8R5L3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Vps39Q8R5L3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vps39Q8R5L3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps39Q8R5L3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Vps39Q8R5L3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps39Q8R5L3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Vps39Q8R5L3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vps39Q8R5L3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps39Q8R5L3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vps39Q8R5L3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.04■□□□□ -0
Vps39Q8R5L3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vps39Q8R5L3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.04■□□□□ -0
Vps39Q8R5L3 Gm25990-201ENSMUST00000102440 86 ntBASIC15.04■□□□□ -0
Vps39Q8R5L3 Gm7222-201ENSMUST00000117512 906 ntBASIC15.04■□□□□ -0
Vps39Q8R5L3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.04■□□□□ -0
Vps39Q8R5L3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.04■□□□□ -0
Vps39Q8R5L3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.04■□□□□ -0
Vps39Q8R5L3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.04■□□□□ -0
Vps39Q8R5L3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.04■□□□□ -0
Vps39Q8R5L3 Gm37153-201ENSMUST00000193637 231 ntBASIC15.04■□□□□ -0
Vps39Q8R5L3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.04■□□□□ -0
Vps39Q8R5L3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.04■□□□□ -0
Vps39Q8R5L3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.04■□□□□ -0
Vps39Q8R5L3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps39Q8R5L3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.03■□□□□ -0
Vps39Q8R5L3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Vps39Q8R5L3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vps39Q8R5L3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vps39Q8R5L3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.03■□□□□ -0
Vps39Q8R5L3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.03■□□□□ -0
Vps39Q8R5L3 Gm27459-201ENSMUST00000184860 107 ntBASIC15.03■□□□□ -0
Vps39Q8R5L3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.03■□□□□ -0
Vps39Q8R5L3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.03■□□□□ -0
Vps39Q8R5L3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vps39Q8R5L3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vps39Q8R5L3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
Vps39Q8R5L3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.03■□□□□ -0
Vps39Q8R5L3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vps39Q8R5L3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Vps39Q8R5L3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps39Q8R5L3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Vps39Q8R5L3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
Vps39Q8R5L3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.02■□□□□ -0
Vps39Q8R5L3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
Vps39Q8R5L3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.02■□□□□ -0
Vps39Q8R5L3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps39Q8R5L3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms