Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC21.12■□□□□ 0.97
Cd109Q8R422 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC21.12■□□□□ 0.97
Cd109Q8R422 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC21.12■□□□□ 0.97
Cd109Q8R422 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC21.12■□□□□ 0.97
Cd109Q8R422 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Gm30437-201ENSMUST00000206086 1201 ntBASIC21.12■□□□□ 0.97
Cd109Q8R422 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC21.12■□□□□ 0.97
Cd109Q8R422 Gm46209-201ENSMUST00000217912 553 ntBASIC21.12■□□□□ 0.97
Cd109Q8R422 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cd109Q8R422 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd109Q8R422 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd109Q8R422 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd109Q8R422 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.11■□□□□ 0.97
Cd109Q8R422 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cd109Q8R422 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC21.11■□□□□ 0.97
Cd109Q8R422 Asic1-205ENSMUST00000228185 1818 ntBASIC21.11■□□□□ 0.97
Cd109Q8R422 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd109Q8R422 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd109Q8R422 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd109Q8R422 Gm4204-201ENSMUST00000110798 1231 ntBASIC21.11■□□□□ 0.97
Cd109Q8R422 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC21.11■□□□□ 0.97
Cd109Q8R422 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd109Q8R422 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cd109Q8R422 AC238811.1-201ENSMUST00000225302 441 ntBASIC21.11■□□□□ 0.97
Cd109Q8R422 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd109Q8R422 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cd109Q8R422 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd109Q8R422 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd109Q8R422 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cd109Q8R422 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd109Q8R422 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Cd109Q8R422 Gm42901-201ENSMUST00000197735 3171 ntBASIC21.1■□□□□ 0.97
Cd109Q8R422 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd109Q8R422 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cd109Q8R422 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd109Q8R422 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
Cd109Q8R422 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd109Q8R422 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cd109Q8R422 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cd109Q8R422 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd109Q8R422 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC21.09■□□□□ 0.97
Cd109Q8R422 Cd63-ps-201ENSMUST00000145417 875 ntBASIC21.09■□□□□ 0.97
Cd109Q8R422 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd109Q8R422 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd109Q8R422 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cd109Q8R422 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd109Q8R422 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd109Q8R422 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd109Q8R422 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd109Q8R422 Gm22189-201ENSMUST00000103822 86 ntBASIC21.08■□□□□ 0.97
Cd109Q8R422 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC21.08■□□□□ 0.97
Cd109Q8R422 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC21.08■□□□□ 0.97
Cd109Q8R422 AC135669.1-201ENSMUST00000213585 412 ntBASIC21.08■□□□□ 0.97
Cd109Q8R422 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd109Q8R422 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cd109Q8R422 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd109Q8R422 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd109Q8R422 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cd109Q8R422 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cd109Q8R422 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
Cd109Q8R422 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cd109Q8R422 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Cd109Q8R422 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cd109Q8R422 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cd109Q8R422 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Cd109Q8R422 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cd109Q8R422 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 AC133083.1-201ENSMUST00000221736 2209 ntBASIC21.07■□□□□ 0.96
Cd109Q8R422 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cd109Q8R422 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd109Q8R422 Gm3436-201ENSMUST00000179930 840 ntBASIC21.07■□□□□ 0.96
Cd109Q8R422 Gm9726-201ENSMUST00000180321 678 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms