Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp7Q8R1T1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp7Q8R1T1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chmp7Q8R1T1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chmp7Q8R1T1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Gm13823-201ENSMUST00000119930 345 ntBASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Gm9063-201ENSMUST00000223299 582 ntBASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chmp7Q8R1T1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms