Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Thap2-203ENSMUST00000218989 527 ntBASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.58□□□□□ -0.4
Hoxc12Q8K5B8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Gm4995-201ENSMUST00000117247 432 ntBASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Gm15427-201ENSMUST00000117288 531 ntBASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.57□□□□□ -0.4
Hoxc12Q8K5B8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc12Q8K5B8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms