Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sf3a1Q8K4Z5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Gm5177-201ENSMUST00000183092 997 ntBASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sf3a1Q8K4Z5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Gm43767-201ENSMUST00000198933 381 ntBASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sf3a1Q8K4Z5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Mir3113-201ENSMUST00000175478 76 ntBASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sf3a1Q8K4Z5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sf3a1Q8K4Z5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.33■□□□□ 0.53
Sf3a1Q8K4Z5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sf3a1Q8K4Z5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sf3a1Q8K4Z5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sf3a1Q8K4Z5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Sf3a1Q8K4Z5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms