Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ebf4Q8K4J2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Celf4-206ENSMUST00000224553 1729 ntBASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ebf4Q8K4J2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ebf4Q8K4J2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.67□□□□□ -0.22
Ebf4Q8K4J2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms