Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Celf4-206ENSMUST00000224553 1729 ntBASIC14.18□□□□□ -0.14
Clrn1Q8K445 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn1Q8K445 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn1Q8K445 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn1Q8K445 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.15□□□□□ -0.14
Clrn1Q8K445 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Gm27300-201ENSMUST00000184085 97 ntBASIC14.15□□□□□ -0.14
Clrn1Q8K445 Gm27335-201ENSMUST00000184758 97 ntBASIC14.15□□□□□ -0.14
Clrn1Q8K445 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.15□□□□□ -0.14
Clrn1Q8K445 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clrn1Q8K445 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms