Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.31■□□□□ 0.2
Trim68Q8K243 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim68Q8K243 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim68Q8K243 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trim68Q8K243 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.3■□□□□ 0.2
Trim68Q8K243 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim68Q8K243 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Trim68Q8K243 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim68Q8K243 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim68Q8K243 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.3■□□□□ 0.2
Trim68Q8K243 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Gm19164-201ENSMUST00000210667 640 ntBASIC16.3■□□□□ 0.2
Trim68Q8K243 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim68Q8K243 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Trim68Q8K243 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim68Q8K243 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim68Q8K243 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim68Q8K243 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.29■□□□□ 0.2
Trim68Q8K243 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim68Q8K243 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.29■□□□□ 0.2
Trim68Q8K243 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim68Q8K243 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim68Q8K243 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim68Q8K243 Gm27622-201ENSMUST00000183779 60 ntBASIC16.29■□□□□ 0.2
Trim68Q8K243 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.29■□□□□ 0.2
Trim68Q8K243 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.29■□□□□ 0.2
Trim68Q8K243 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim68Q8K243 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim68Q8K243 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim68Q8K243 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim68Q8K243 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trim68Q8K243 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trim68Q8K243 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim68Q8K243 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim68Q8K243 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim68Q8K243 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim68Q8K243 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim68Q8K243 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim68Q8K243 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim68Q8K243 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.28■□□□□ 0.2
Trim68Q8K243 Gm7774-201ENSMUST00000200064 533 ntBASIC16.28■□□□□ 0.2
Trim68Q8K243 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.28■□□□□ 0.2
Trim68Q8K243 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.28■□□□□ 0.2
Trim68Q8K243 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim68Q8K243 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim68Q8K243 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim68Q8K243 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim68Q8K243 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim68Q8K243 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim68Q8K243 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim68Q8K243 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim68Q8K243 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms