Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Gm5566-201ENSMUST00000116118 459 ntBASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtp1Q8C8C1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Mir1897-201ENSMUST00000122581 272 ntBASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.04■□□□□ 0.32
Rtp1Q8C8C1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Gm17150-201ENSMUST00000165577 381 ntBASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Gm37917-201ENSMUST00000194711 392 ntBASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Gm43703-201ENSMUST00000200523 763 ntBASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.03■□□□□ 0.32
Rtp1Q8C8C1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Gm46209-201ENSMUST00000217912 553 ntBASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtp1Q8C8C1 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.02■□□□□ 0.31
Rtp1Q8C8C1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms