Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.42□□□□□ -0.26
Rft1Q8C3B8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rft1Q8C3B8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rft1Q8C3B8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Gm25745-201ENSMUST00000174945 133 ntBASIC13.39□□□□□ -0.27
Rft1Q8C3B8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rft1Q8C3B8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rft1Q8C3B8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms