Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh3rf3Q8C120 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Gm7787-201ENSMUST00000216858 688 ntBASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh3rf3Q8C120 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh3rf3Q8C120 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Gm18246-201ENSMUST00000221023 728 ntBASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.63■□□□□ 0.09
Sh3rf3Q8C120 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Gm27300-201ENSMUST00000184085 97 ntBASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Gm27335-201ENSMUST00000184758 97 ntBASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3rf3Q8C120 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms