Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Gm7461-201ENSMUST00000058918 827 ntBASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trub1Q8C0D0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trub1Q8C0D0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trub1Q8C0D0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trub1Q8C0D0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trub1Q8C0D0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Trub1Q8C0D0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trub1Q8C0D0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.45■□□□□ 0.06
Trub1Q8C0D0 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.45■□□□□ 0.06
Trub1Q8C0D0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trub1Q8C0D0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trub1Q8C0D0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.45■□□□□ 0.06
Trub1Q8C0D0 Gm13597-201ENSMUST00000121239 375 ntBASIC15.45■□□□□ 0.06
Trub1Q8C0D0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.45■□□□□ 0.06
Trub1Q8C0D0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trub1Q8C0D0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trub1Q8C0D0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trub1Q8C0D0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trub1Q8C0D0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Gm12008-201ENSMUST00000117791 755 ntBASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Gm18733-201ENSMUST00000173950 856 ntBASIC15.44■□□□□ 0.06
Trub1Q8C0D0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms