Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sfr1Q8BP27 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Gm12260-201ENSMUST00000122447 411 ntBASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Gm27525-201ENSMUST00000184465 107 ntBASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sfr1Q8BP27 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sfr1Q8BP27 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sfr1Q8BP27 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Gm15467-201ENSMUST00000120582 445 ntBASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sfr1Q8BP27 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms