Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Gm33320-201ENSMUST00000192232 530 ntBASIC21.06■□□□□ 0.96
Usp54Q8BL06 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC21.06■□□□□ 0.96
Usp54Q8BL06 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp54Q8BL06 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Gm8131-201ENSMUST00000213783 1570 ntBASIC21.05■□□□□ 0.96
Usp54Q8BL06 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC21.05■□□□□ 0.96
Usp54Q8BL06 AC139580.1-202ENSMUST00000223574 928 ntBASIC21.05■□□□□ 0.96
Usp54Q8BL06 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp54Q8BL06 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC21.04■□□□□ 0.96
Usp54Q8BL06 AC121804.3-201ENSMUST00000223420 295 ntBASIC21.04■□□□□ 0.96
Usp54Q8BL06 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC21.04■□□□□ 0.96
Usp54Q8BL06 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Usp54Q8BL06 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp54Q8BL06 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp54Q8BL06 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp54Q8BL06 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp54Q8BL06 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp54Q8BL06 AC155286.1-201ENSMUST00000218632 448 ntBASIC21.03■□□□□ 0.96
Usp54Q8BL06 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp54Q8BL06 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Usp54Q8BL06 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp54Q8BL06 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
Usp54Q8BL06 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp54Q8BL06 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp54Q8BL06 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp54Q8BL06 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Usp54Q8BL06 AC093043.3-201ENSMUST00000226531 2273 ntBASIC21.02■□□□□ 0.96
Usp54Q8BL06 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp54Q8BL06 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp54Q8BL06 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp54Q8BL06 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Usp54Q8BL06 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp54Q8BL06 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Usp54Q8BL06 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC21.02■□□□□ 0.95
Usp54Q8BL06 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Usp54Q8BL06 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp54Q8BL06 AC165157.4-201ENSMUST00000220587 139 ntBASIC21.02■□□□□ 0.95
Usp54Q8BL06 Gm19220-201ENSMUST00000222682 803 ntBASIC21.02■□□□□ 0.95
Usp54Q8BL06 AC125350.2-201ENSMUST00000224737 727 ntBASIC21.02■□□□□ 0.95
Usp54Q8BL06 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp54Q8BL06 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp54Q8BL06 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp54Q8BL06 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp54Q8BL06 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp54Q8BL06 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp54Q8BL06 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp54Q8BL06 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms