Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm9522-201ENSMUST00000182394 926 ntBASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Gm23931-201ENSMUST00000103842 109 ntBASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Gm9797-201ENSMUST00000052902 613 ntBASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smg1Q8BKX6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smg1Q8BKX6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Gm15808-201ENSMUST00000119046 604 ntBASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Gm10766-202ENSMUST00000194123 606 ntBASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smg1Q8BKX6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smg1Q8BKX6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smg1Q8BKX6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms