Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Gm18622-201ENSMUST00000219361 595 ntBASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.68□□□□□ -0.06
Pcdh20Q8BIZ0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Gm11780-201ENSMUST00000136880 516 ntBASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Mir5131-201ENSMUST00000175426 93 ntBASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Gm6089-201ENSMUST00000197666 938 ntBASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh20Q8BIZ0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh20Q8BIZ0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh20Q8BIZ0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms