Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf38Q8BI21 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf38Q8BI21 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Gm27646-201ENSMUST00000183989 110 ntBASIC14.5□□□□□ -0.09
Rnf38Q8BI21 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.5□□□□□ -0.09
Rnf38Q8BI21 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rnf38Q8BI21 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.49□□□□□ -0.09
Rnf38Q8BI21 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf38Q8BI21 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms