Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clrn3Q8BHH8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Gm27741-201ENSMUST00000185060 237 ntBASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 AV026068-213ENSMUST00000223675 1171 ntBASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clrn3Q8BHH8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 BC037039-201ENSMUST00000192003 2205 ntBASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Gm15173-201ENSMUST00000122049 433 ntBASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Gm7787-201ENSMUST00000216858 688 ntBASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Clrn3Q8BHH8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Clrn3Q8BHH8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms