Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc5a7Q8BGY9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Mir5130-201ENSMUST00000175160 84 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm8825-201ENSMUST00000182565 998 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm4518-201ENSMUST00000182638 718 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc5a7Q8BGY9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Slc5a7Q8BGY9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc5a7Q8BGY9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms