Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.64□□□□□ -0.07
Trim50Q810I2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.64□□□□□ -0.07
Trim50Q810I2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim50Q810I2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim50Q810I2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.63□□□□□ -0.07
Trim50Q810I2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
Trim50Q810I2 Gm18246-201ENSMUST00000221023 728 ntBASIC14.63□□□□□ -0.07
Trim50Q810I2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
Trim50Q810I2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.63□□□□□ -0.07
Trim50Q810I2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim50Q810I2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trim50Q810I2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim50Q810I2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim50Q810I2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim50Q810I2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim50Q810I2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.62□□□□□ -0.07
Trim50Q810I2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim50Q810I2 Gm27300-201ENSMUST00000184085 97 ntBASIC14.62□□□□□ -0.07
Trim50Q810I2 Gm27335-201ENSMUST00000184758 97 ntBASIC14.62□□□□□ -0.07
Trim50Q810I2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.62□□□□□ -0.07
Trim50Q810I2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.62□□□□□ -0.07
Trim50Q810I2 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.62□□□□□ -0.07
Trim50Q810I2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trim50Q810I2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim50Q810I2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim50Q810I2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim50Q810I2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Trim50Q810I2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.61□□□□□ -0.07
Trim50Q810I2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trim50Q810I2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.61□□□□□ -0.07
Trim50Q810I2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim50Q810I2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.61□□□□□ -0.07
Trim50Q810I2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim50Q810I2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.61□□□□□ -0.07
Trim50Q810I2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim50Q810I2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim50Q810I2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim50Q810I2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trim50Q810I2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim50Q810I2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim50Q810I2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim50Q810I2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim50Q810I2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim50Q810I2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim50Q810I2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim50Q810I2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim50Q810I2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim50Q810I2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms