Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ttc28Q80XJ3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc28Q80XJ3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc28Q80XJ3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc28Q80XJ3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc28Q80XJ3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ttc28Q80XJ3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ttc28Q80XJ3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.52□□□□□ -0.4
Ttc28Q80XJ3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc28Q80XJ3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc28Q80XJ3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.52□□□□□ -0.4
Ttc28Q80XJ3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc28Q80XJ3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc28Q80XJ3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc28Q80XJ3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc28Q80XJ3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc28Q80XJ3 Gm28760-201ENSMUST00000185995 736 ntBASIC12.52□□□□□ -0.41
Ttc28Q80XJ3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc28Q80XJ3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ttc28Q80XJ3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ttc28Q80XJ3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ttc28Q80XJ3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ttc28Q80XJ3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms