Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Gm43767-201ENSMUST00000198933 381 ntBASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ccdc116Q80X53 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc116Q80X53 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ccdc116Q80X53 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc116Q80X53 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc116Q80X53 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc116Q80X53 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
Ccdc116Q80X53 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Gm13884-201ENSMUST00000118103 829 ntBASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Gm5864-201ENSMUST00000202263 970 ntBASIC14.7□□□□□ -0.06
Ccdc116Q80X53 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc116Q80X53 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc116Q80X53 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc116Q80X53 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.68□□□□□ -0.06
Ccdc116Q80X53 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc116Q80X53 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc116Q80X53 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc116Q80X53 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc116Q80X53 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc116Q80X53 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.68□□□□□ -0.06
Ccdc116Q80X53 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.68□□□□□ -0.06
Ccdc116Q80X53 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc116Q80X53 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.68□□□□□ -0.06
Ccdc116Q80X53 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc116Q80X53 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc116Q80X53 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms