Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim36Q80WG7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim36Q80WG7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim36Q80WG7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim36Q80WG7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.5□□□□□ -0.09
Trim36Q80WG7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.5□□□□□ -0.09
Trim36Q80WG7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim36Q80WG7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim36Q80WG7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Mir5131-201ENSMUST00000175426 93 ntBASIC14.49□□□□□ -0.09
Trim36Q80WG7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.49□□□□□ -0.09
Trim36Q80WG7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim36Q80WG7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Gm27525-201ENSMUST00000184465 107 ntBASIC14.48□□□□□ -0.09
Trim36Q80WG7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.48□□□□□ -0.09
Trim36Q80WG7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim36Q80WG7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Trim36Q80WG7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim36Q80WG7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim36Q80WG7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim36Q80WG7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms