Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trim62Q80V85 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim62Q80V85 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim62Q80V85 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim62Q80V85 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.51■□□□□ 0.07
Trim62Q80V85 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.51■□□□□ 0.07
Trim62Q80V85 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.51■□□□□ 0.07
Trim62Q80V85 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim62Q80V85 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim62Q80V85 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim62Q80V85 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trim62Q80V85 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trim62Q80V85 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trim62Q80V85 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim62Q80V85 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.5■□□□□ 0.07
Trim62Q80V85 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.5■□□□□ 0.07
Trim62Q80V85 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.5■□□□□ 0.07
Trim62Q80V85 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.5■□□□□ 0.07
Trim62Q80V85 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trim62Q80V85 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim62Q80V85 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trim62Q80V85 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
Trim62Q80V85 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Trim62Q80V85 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.49■□□□□ 0.07
Trim62Q80V85 Gm11594-201ENSMUST00000122313 162 ntBASIC15.49■□□□□ 0.07
Trim62Q80V85 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.49■□□□□ 0.07
Trim62Q80V85 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Gm37935-201ENSMUST00000192012 982 ntBASIC15.49■□□□□ 0.07
Trim62Q80V85 Gm45612-201ENSMUST00000211320 160 ntBASIC15.49■□□□□ 0.07
Trim62Q80V85 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.49■□□□□ 0.07
Trim62Q80V85 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Trim62Q80V85 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.49■□□□□ 0.07
Trim62Q80V85 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim62Q80V85 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trim62Q80V85 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trim62Q80V85 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trim62Q80V85 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms