Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rpap1Q80TE0 Gm10461-201ENSMUST00000202073 4786 ntBASIC23.04■■□□□ 1.28
Rpap1Q80TE0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rpap1Q80TE0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpap1Q80TE0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpap1Q80TE0 Gm11918-201ENSMUST00000121660 179 ntBASIC23.02■■□□□ 1.28
Rpap1Q80TE0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rpap1Q80TE0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC23.02■■□□□ 1.28
Rpap1Q80TE0 Gm9182-201ENSMUST00000217829 639 ntBASIC23.02■■□□□ 1.28
Rpap1Q80TE0 AC159006.1-201ENSMUST00000226396 258 ntBASIC23.02■■□□□ 1.28
Rpap1Q80TE0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpap1Q80TE0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC23.02■■□□□ 1.28
Rpap1Q80TE0 Gm9899-201ENSMUST00000065519 555 ntBASIC23.02■■□□□ 1.28
Rpap1Q80TE0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rpap1Q80TE0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rpap1Q80TE0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpap1Q80TE0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpap1Q80TE0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpap1Q80TE0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC23■■□□□ 1.27
Rpap1Q80TE0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC23■■□□□ 1.27
Rpap1Q80TE0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpap1Q80TE0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Rpap1Q80TE0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Gm17150-201ENSMUST00000165577 381 ntBASIC22.99■■□□□ 1.27
Rpap1Q80TE0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC22.99■■□□□ 1.27
Rpap1Q80TE0 AC123645.1-201ENSMUST00000228469 605 ntBASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC22.99■■□□□ 1.27
Rpap1Q80TE0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpap1Q80TE0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Rpap1Q80TE0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms