Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Gm16198-201ENSMUST00000118766 670 ntBASIC16.42■□□□□ 0.22
Ush1gQ80T11 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.42■□□□□ 0.22
Ush1gQ80T11 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ush1gQ80T11 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.42■□□□□ 0.22
Ush1gQ80T11 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.41■□□□□ 0.22
Ush1gQ80T11 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Gm9385-201ENSMUST00000117563 472 ntBASIC16.41■□□□□ 0.22
Ush1gQ80T11 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.41■□□□□ 0.22
Ush1gQ80T11 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.41■□□□□ 0.22
Ush1gQ80T11 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.41■□□□□ 0.22
Ush1gQ80T11 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.41■□□□□ 0.22
Ush1gQ80T11 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ush1gQ80T11 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.4■□□□□ 0.22
Ush1gQ80T11 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.4■□□□□ 0.22
Ush1gQ80T11 Gm10154-201ENSMUST00000084445 354 ntBASIC16.4■□□□□ 0.22
Ush1gQ80T11 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ush1gQ80T11 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ush1gQ80T11 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ush1gQ80T11 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Sybu-209ENSMUST00000228639 4113 ntBASIC16.39■□□□□ 0.21
Ush1gQ80T11 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.39■□□□□ 0.21
Ush1gQ80T11 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.39■□□□□ 0.21
Ush1gQ80T11 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.39■□□□□ 0.21
Ush1gQ80T11 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.39■□□□□ 0.21
Ush1gQ80T11 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.39■□□□□ 0.21
Ush1gQ80T11 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Ush1gQ80T11 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ush1gQ80T11 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ush1gQ80T11 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ush1gQ80T11 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ush1gQ80T11 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms