Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm22065-201ENSMUST00000103753 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm22066-201ENSMUST00000103761 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm24932-201ENSMUST00000103763 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm24115-201ENSMUST00000103799 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm22190-201ENSMUST00000103827 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm22191-201ENSMUST00000103831 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm24721-201ENSMUST00000103849 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm28018-201ENSMUST00000103869 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm26399-201ENSMUST00000103937 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.86□□□□□ -0.19
Pif1Q80SX8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm25349-201ENSMUST00000177728 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm23616-201ENSMUST00000177797 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm25871-201ENSMUST00000177816 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm24752-201ENSMUST00000178240 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm24496-201ENSMUST00000178287 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm25649-201ENSMUST00000178476 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm25548-201ENSMUST00000178681 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm23147-201ENSMUST00000178841 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm26095-201ENSMUST00000179270 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm22171-201ENSMUST00000179283 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm23936-201ENSMUST00000179354 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm22619-201ENSMUST00000179516 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm25255-201ENSMUST00000179579 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm24755-201ENSMUST00000179691 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm26506-201ENSMUST00000179692 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm25086-201ENSMUST00000179931 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm23243-201ENSMUST00000180047 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm24659-201ENSMUST00000180212 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm24169-201ENSMUST00000180244 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm23689-201ENSMUST00000180354 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm27359-201ENSMUST00000184153 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm27785-201ENSMUST00000184268 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm27466-201ENSMUST00000184396 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gm27703-201ENSMUST00000184836 110 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.86□□□□□ -0.19
Pif1Q80SX8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pif1Q80SX8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.85□□□□□ -0.19
Pif1Q80SX8 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.85□□□□□ -0.19
Pif1Q80SX8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pif1Q80SX8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.84□□□□□ -0.19
Pif1Q80SX8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.84□□□□□ -0.19
Pif1Q80SX8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms