Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.4■□□□□ 0.22
Ctdp1Q7TSG2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.39■□□□□ 0.22
Ctdp1Q7TSG2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ctdp1Q7TSG2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm8825-201ENSMUST00000182565 998 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm4518-201ENSMUST00000182638 718 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Ctdp1Q7TSG2 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ctdp1Q7TSG2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Gm44454-201ENSMUST00000198541 138 ntBASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Birc2-201ENSMUST00000054878 378 ntBASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ctdp1Q7TSG2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms