Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sned1Q70E20 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sned1Q70E20 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.85■□□□□ 0.45
Sned1Q70E20 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Sned1Q70E20 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.84■□□□□ 0.45
Sned1Q70E20 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.84■□□□□ 0.45
Sned1Q70E20 Gm29127-201ENSMUST00000188304 517 ntBASIC17.84■□□□□ 0.45
Sned1Q70E20 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.84■□□□□ 0.45
Sned1Q70E20 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sned1Q70E20 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sned1Q70E20 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sned1Q70E20 Dancr-204ENSMUST00000132389 2347 ntBASIC17.84■□□□□ 0.45
Sned1Q70E20 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Sned1Q70E20 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Sned1Q70E20 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sned1Q70E20 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.83■□□□□ 0.45
Sned1Q70E20 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sned1Q70E20 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Sned1Q70E20 Gm27486-201ENSMUST00000184923 80 ntBASIC17.83■□□□□ 0.45
Sned1Q70E20 Gm27731-201ENSMUST00000185192 107 ntBASIC17.83■□□□□ 0.45
Sned1Q70E20 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.83■□□□□ 0.45
Sned1Q70E20 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.83■□□□□ 0.45
Sned1Q70E20 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Sned1Q70E20 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sned1Q70E20 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.83■□□□□ 0.45
Sned1Q70E20 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sned1Q70E20 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sned1Q70E20 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sned1Q70E20 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sned1Q70E20 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.83■□□□□ 0.44
Sned1Q70E20 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sned1Q70E20 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sned1Q70E20 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.83■□□□□ 0.44
Sned1Q70E20 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sned1Q70E20 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.82■□□□□ 0.44
Sned1Q70E20 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.82■□□□□ 0.44
Sned1Q70E20 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.82■□□□□ 0.44
Sned1Q70E20 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.82■□□□□ 0.44
Sned1Q70E20 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sned1Q70E20 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.82■□□□□ 0.44
Sned1Q70E20 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sned1Q70E20 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.81■□□□□ 0.44
Sned1Q70E20 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sned1Q70E20 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sned1Q70E20 Gm11814-201ENSMUST00000119515 929 ntBASIC17.81■□□□□ 0.44
Sned1Q70E20 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.81■□□□□ 0.44
Sned1Q70E20 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.81■□□□□ 0.44
Sned1Q70E20 Gm8652-201ENSMUST00000181363 964 ntBASIC17.81■□□□□ 0.44
Sned1Q70E20 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.81■□□□□ 0.44
Sned1Q70E20 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sned1Q70E20 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sned1Q70E20 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sned1Q70E20 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sned1Q70E20 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sned1Q70E20 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.81■□□□□ 0.44
Sned1Q70E20 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sned1Q70E20 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.81■□□□□ 0.44
Sned1Q70E20 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sned1Q70E20 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sned1Q70E20 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.81■□□□□ 0.44
Sned1Q70E20 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sned1Q70E20 Gm17795-201ENSMUST00000214505 757 ntBASIC17.81■□□□□ 0.44
Sned1Q70E20 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.81■□□□□ 0.44
Sned1Q70E20 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sned1Q70E20 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.8■□□□□ 0.44
Sned1Q70E20 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.8■□□□□ 0.44
Sned1Q70E20 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sned1Q70E20 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sned1Q70E20 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sned1Q70E20 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sned1Q70E20 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Sned1Q70E20 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sned1Q70E20 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sned1Q70E20 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sned1Q70E20 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.8■□□□□ 0.44
Sned1Q70E20 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms