Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.72■□□□□ 0.11
Lsm8Q6ZWM4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm8Q6ZWM4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm8Q6ZWM4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm8Q6ZWM4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm8Q6ZWM4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm8Q6ZWM4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm8Q6ZWM4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm8Q6ZWM4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm8Q6ZWM4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Gm1401-201ENSMUST00000122048 772 ntBASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm8Q6ZWM4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm8Q6ZWM4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms