Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shc4Q6S5L9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Gm15427-201ENSMUST00000117288 531 ntBASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Thap2-203ENSMUST00000218989 527 ntBASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.04□□□□□ -0.16
Shc4Q6S5L9 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shc4Q6S5L9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Gm15920-201ENSMUST00000118998 402 ntBASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shc4Q6S5L9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shc4Q6S5L9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Shc4Q6S5L9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Shc4Q6S5L9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shc4Q6S5L9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shc4Q6S5L9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Shc4Q6S5L9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Shc4Q6S5L9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shc4Q6S5L9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Shc4Q6S5L9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shc4Q6S5L9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shc4Q6S5L9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.02□□□□□ -0.17
Shc4Q6S5L9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms