Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.61□□□□□ -0.39
Rif1Q6PR54 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.61□□□□□ -0.39
Rif1Q6PR54 Gm15483-201ENSMUST00000120338 456 ntBASIC12.61□□□□□ -0.39
Rif1Q6PR54 AA619741-201ENSMUST00000195095 646 ntBASIC12.61□□□□□ -0.39
Rif1Q6PR54 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Gm11628-201ENSMUST00000117568 171 ntBASIC12.61□□□□□ -0.39
Rif1Q6PR54 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Gm27514-201ENSMUST00000183692 110 ntBASIC12.61□□□□□ -0.39
Rif1Q6PR54 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.61□□□□□ -0.39
Rif1Q6PR54 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rif1Q6PR54 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.6□□□□□ -0.39
Rif1Q6PR54 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.6□□□□□ -0.39
Rif1Q6PR54 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gm27516-201ENSMUST00000184237 98 ntBASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gm37259-201ENSMUST00000193903 849 ntBASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Gm7561-201ENSMUST00000211203 886 ntBASIC12.6□□□□□ -0.39
Rif1Q6PR54 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rif1Q6PR54 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Gm27572-201ENSMUST00000183702 255 ntBASIC12.59□□□□□ -0.39
Rif1Q6PR54 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Gm2495-201ENSMUST00000191160 466 ntBASIC12.59□□□□□ -0.39
Rif1Q6PR54 Gm44364-201ENSMUST00000198368 141 ntBASIC12.59□□□□□ -0.39
Rif1Q6PR54 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.59□□□□□ -0.39
Rif1Q6PR54 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rif1Q6PR54 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms