Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Gm15358-201ENSMUST00000119249 520 ntBASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf4Q6PFF0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Gm10252-201ENSMUST00000209541 832 ntBASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf4Q6PFF0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Gm27867-201ENSMUST00000184778 125 ntBASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scaf4Q6PFF0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Gm27742-201ENSMUST00000184667 60 ntBASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scaf4Q6PFF0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms