Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Slc46a1Q6PEM8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc46a1Q6PEM8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Slc46a1Q6PEM8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Slc46a1Q6PEM8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Gm12008-201ENSMUST00000117791 755 ntBASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Slc46a1Q6PEM8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Slc46a1Q6PEM8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc46a1Q6PEM8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc46a1Q6PEM8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc46a1Q6PEM8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc46a1Q6PEM8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Slc46a1Q6PEM8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Slc46a1Q6PEM8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc46a1Q6PEM8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc46a1Q6PEM8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Slc46a1Q6PEM8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc46a1Q6PEM8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Slc46a1Q6PEM8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Gm10576-201ENSMUST00000191927 825 ntBASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc46a1Q6PEM8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc46a1Q6PEM8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms