Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnf220Q6PDX6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Gm7889-201ENSMUST00000185591 958 ntBASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Gm18959-201ENSMUST00000208954 655 ntBASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.26□□□□□ -0.13
Rnf220Q6PDX6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rnf220Q6PDX6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rnf220Q6PDX6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms