Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hmgb4Q6P8W9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Gm13365-201ENSMUST00000121188 973 ntBASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Thap2-203ENSMUST00000218989 527 ntBASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Gm8396-201ENSMUST00000057361 823 ntBASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hmgb4Q6P8W9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 BC037039-201ENSMUST00000192003 2205 ntBASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Gm15920-201ENSMUST00000118998 402 ntBASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Gm11745-201ENSMUST00000121669 448 ntBASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Gm44335-201ENSMUST00000196879 141 ntBASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Gm44297-201ENSMUST00000198304 141 ntBASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Gm44346-201ENSMUST00000198851 141 ntBASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hmgb4Q6P8W9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.71■□□□□ 0.11
Hmgb4Q6P8W9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgb4Q6P8W9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.1
Hmgb4Q6P8W9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgb4Q6P8W9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgb4Q6P8W9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hmgb4Q6P8W9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms