Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm21873-201ENSMUST00000186728 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21794-201ENSMUST00000187056 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21880-201ENSMUST00000187275 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21826-201ENSMUST00000187451 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21198-201ENSMUST00000188393 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21749-201ENSMUST00000189343 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21901-201ENSMUST00000189568 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm29424-201ENSMUST00000189716 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm28599-201ENSMUST00000189838 694 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21867-201ENSMUST00000189917 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm29269-201ENSMUST00000190087 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21722-201ENSMUST00000190153 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm28423-201ENSMUST00000190701 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21899-201ENSMUST00000190745 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21910-201ENSMUST00000191163 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21849-201ENSMUST00000191571 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm28678-201ENSMUST00000191593 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm20910-201ENSMUST00000193268 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm21871-201ENSMUST00000194621 696 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smchd1Q6P5D8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smchd1Q6P5D8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Smchd1Q6P5D8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Gm6415-201ENSMUST00000118488 348 ntBASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Gm18737-201ENSMUST00000173594 937 ntBASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Gm10253-201ENSMUST00000194270 940 ntBASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.39■□□□□ 0.21
Smchd1Q6P5D8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smchd1Q6P5D8 Efs-202ENSMUST00000227037 2540 ntBASIC16.38■□□□□ 0.21
Smchd1Q6P5D8 Gm13823-201ENSMUST00000119930 345 ntBASIC16.38■□□□□ 0.21
Smchd1Q6P5D8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smchd1Q6P5D8 Gm22175-201ENSMUST00000175007 78 ntBASIC16.38■□□□□ 0.21
Smchd1Q6P5D8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.38■□□□□ 0.21
Smchd1Q6P5D8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.38■□□□□ 0.21
Smchd1Q6P5D8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smchd1Q6P5D8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smchd1Q6P5D8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms