Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Abcf1Q6P542 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.82■□□□□ 0.28
Abcf1Q6P542 Gm7506-201ENSMUST00000207758 815 ntBASIC16.82■□□□□ 0.28
Abcf1Q6P542 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.82■□□□□ 0.28
Abcf1Q6P542 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.82■□□□□ 0.28
Abcf1Q6P542 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.82■□□□□ 0.28
Abcf1Q6P542 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Abcf1Q6P542 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Abcf1Q6P542 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.81■□□□□ 0.28
Abcf1Q6P542 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.81■□□□□ 0.28
Abcf1Q6P542 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.81■□□□□ 0.28
Abcf1Q6P542 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Rps4l-201ENSMUST00000071745 943 ntBASIC16.81■□□□□ 0.28
Abcf1Q6P542 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Abcf1Q6P542 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm12497-201ENSMUST00000138778 237 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm8825-201ENSMUST00000182565 998 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm4518-201ENSMUST00000182638 718 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm6376-201ENSMUST00000209407 580 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.8■□□□□ 0.28
Abcf1Q6P542 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Abcf1Q6P542 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms