Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.62□□□□□ -0.07
Pcdhga7Q6DD96 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Gm11780-201ENSMUST00000136880 516 ntBASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhga7Q6DD96 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Ank2-226ENSMUST00000189368 339 ntBASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga7Q6DD96 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Celf4-206ENSMUST00000224553 1729 ntBASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.59□□□□□ -0.07
Pcdhga7Q6DD96 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms