Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.13■□□□□ 0.17
Pds5aQ6A026 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pds5aQ6A026 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.12■□□□□ 0.17
Pds5aQ6A026 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pds5aQ6A026 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.11■□□□□ 0.17
Pds5aQ6A026 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.11■□□□□ 0.17
Pds5aQ6A026 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pds5aQ6A026 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Gm11025-201ENSMUST00000140773 466 ntBASIC16.1■□□□□ 0.17
Pds5aQ6A026 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.1■□□□□ 0.17
Pds5aQ6A026 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pds5aQ6A026 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms