Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.18□□□□□ -0.46
Col7a1Q63870 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col7a1Q63870 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.18□□□□□ -0.46
Col7a1Q63870 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.18□□□□□ -0.46
Col7a1Q63870 Gm13689-201ENSMUST00000119360 685 ntBASIC12.17□□□□□ -0.46
Col7a1Q63870 Gm2383-201ENSMUST00000181461 807 ntBASIC12.17□□□□□ -0.46
Col7a1Q63870 Gm29396-201ENSMUST00000185659 716 ntBASIC12.17□□□□□ -0.46
Col7a1Q63870 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.17□□□□□ -0.46
Col7a1Q63870 Gm43133-201ENSMUST00000197472 463 ntBASIC12.17□□□□□ -0.46
Col7a1Q63870 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.17□□□□□ -0.46
Col7a1Q63870 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Col7a1Q63870 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.17□□□□□ -0.46
Col7a1Q63870 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.17□□□□□ -0.46
Col7a1Q63870 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.17□□□□□ -0.46
Col7a1Q63870 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.17□□□□□ -0.46
Col7a1Q63870 Gm9368-201ENSMUST00000219348 831 ntBASIC12.17□□□□□ -0.46
Col7a1Q63870 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Mir433-201ENSMUST00000093564 124 ntBASIC12.17□□□□□ -0.46
Col7a1Q63870 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col7a1Q63870 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Gm13297-201ENSMUST00000120205 934 ntBASIC12.17□□□□□ -0.46
Col7a1Q63870 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.17□□□□□ -0.46
Col7a1Q63870 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Col7a1Q63870 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.17□□□□□ -0.46
Col7a1Q63870 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col7a1Q63870 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.16□□□□□ -0.46
Col7a1Q63870 Gm5523-201ENSMUST00000180415 997 ntBASIC12.16□□□□□ -0.46
Col7a1Q63870 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.16□□□□□ -0.46
Col7a1Q63870 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.16□□□□□ -0.46
Col7a1Q63870 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.16□□□□□ -0.46
Col7a1Q63870 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.16□□□□□ -0.46
Col7a1Q63870 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.16□□□□□ -0.46
Col7a1Q63870 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Col7a1Q63870 Gm14381-201ENSMUST00000122105 414 ntBASIC12.16□□□□□ -0.46
Col7a1Q63870 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.16□□□□□ -0.46
Col7a1Q63870 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.16□□□□□ -0.46
Col7a1Q63870 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.16□□□□□ -0.46
Col7a1Q63870 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.16□□□□□ -0.46
Col7a1Q63870 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col7a1Q63870 Cts7-204ENSMUST00000225321 1257 ntBASIC12.16□□□□□ -0.46
Col7a1Q63870 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.16□□□□□ -0.46
Col7a1Q63870 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col7a1Q63870 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col7a1Q63870 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col7a1Q63870 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.16□□□□□ -0.46
Col7a1Q63870 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col7a1Q63870 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col7a1Q63870 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col7a1Q63870 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.15□□□□□ -0.46
Col7a1Q63870 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm13612-201ENSMUST00000119276 390 ntBASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm17376-201ENSMUST00000166016 84 ntBASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm37008-201ENSMUST00000195712 319 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms