Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ptp4a1Q63739 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ptp4a1Q63739 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ptp4a1Q63739 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ptp4a1Q63739 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ptp4a1Q63739 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ptp4a1Q63739 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ptp4a1Q63739 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ptp4a1Q63739 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ptp4a1Q63739 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ptp4a1Q63739 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ptp4a1Q63739 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Carlr-201ENSMUST00000181515 2574 ntBASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ptp4a1Q63739 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ptp4a1Q63739 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.52□□□□□ -0.24
Ptp4a1Q63739 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ptp4a1Q63739 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.52□□□□□ -0.24
Ptp4a1Q63739 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ptp4a1Q63739 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ptp4a1Q63739 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ptp4a1Q63739 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ptp4a1Q63739 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Gm8097-201ENSMUST00000117903 829 ntBASIC13.52□□□□□ -0.25
Ptp4a1Q63739 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Gm10819-201ENSMUST00000099988 561 ntBASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.52□□□□□ -0.25
Ptp4a1Q63739 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptp4a1Q63739 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms