Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim27Q62158 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim27Q62158 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim27Q62158 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim27Q62158 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim27Q62158 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Trim27Q62158 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
Trim27Q62158 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim27Q62158 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim27Q62158 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim27Q62158 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.41■□□□□ 0.54
Trim27Q62158 Gm5364-201ENSMUST00000216789 889 ntBASIC18.41■□□□□ 0.54
Trim27Q62158 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim27Q62158 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim27Q62158 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim27Q62158 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim27Q62158 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim27Q62158 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim27Q62158 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim27Q62158 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim27Q62158 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.4■□□□□ 0.54
Trim27Q62158 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.4■□□□□ 0.54
Trim27Q62158 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.4■□□□□ 0.54
Trim27Q62158 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Trim27Q62158 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim27Q62158 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim27Q62158 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim27Q62158 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim27Q62158 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim27Q62158 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim27Q62158 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.54
Trim27Q62158 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim27Q62158 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim27Q62158 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.39■□□□□ 0.53
Trim27Q62158 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim27Q62158 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim27Q62158 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim27Q62158 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trim27Q62158 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.39■□□□□ 0.53
Trim27Q62158 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim27Q62158 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim27Q62158 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim27Q62158 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim27Q62158 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim27Q62158 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim27Q62158 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim27Q62158 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim27Q62158 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim27Q62158 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim27Q62158 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trim27Q62158 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim27Q62158 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim27Q62158 Gm45747-201ENSMUST00000212203 999 ntBASIC18.38■□□□□ 0.53
Trim27Q62158 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim27Q62158 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.38■□□□□ 0.53
Trim27Q62158 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim27Q62158 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim27Q62158 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.38■□□□□ 0.53
Trim27Q62158 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim27Q62158 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim27Q62158 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim27Q62158 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim27Q62158 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim27Q62158 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim27Q62158 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim27Q62158 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trim27Q62158 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim27Q62158 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim27Q62158 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim27Q62158 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim27Q62158 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim27Q62158 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trim27Q62158 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trim27Q62158 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms